rs33528366 SNP Detail

Summary

• ID
  rs33528366
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:103473347 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCTCACAG GTGTCTGTGG
  CAATTGTCTC CTGGGACCTG GCTTGCTTTA TGTTGACCCC AACCTGTATG TGCCTCACTT
  TCTGGGTCTA TACCTGGAGC ACTGGGTGCT GTTTCTGGTC CCCAAGAGCT GTTAGCATTT
  GTCCTCCTGG TATAGCATGG GGCACCACTT GGCGGTTGCT GGAGAGCTTG TAGCAAACTC
  Y
  AGGAGCCATC TTCCTGTGGT CCAGTTGGTA CTTTGAGGAC TCAGCTCCAG TGCCAACCTA
  GTGGCTCATC ACTCACTGGG GGCTGGAACC AGGAAAGGTC TGAAGTCACA GAACCTGATC
  TTTCTGGTCA GAAATATATC CAGAAATTAT GGCTATGGTA GTACCTGAAA ACTCTTTACC
  TATGCCAACT TCTATGGCAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46824296	NES10726854	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33528366					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46824296	NES10726854	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:103473347 () rs orientation: forward

Symbol	Name	Function Class
Rr69865	regulatory region 69865	1654 bp proximal