rs33529529 SNP Detail

Summary

• ID
  rs33529529
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  125
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114160248 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTACGTTCGA CTTTCAAGAG ATGGGTTGTA GTAAGTGATA
  CCACTGTAGA ATGTGTACCC GATGTACTCC AGTTTGTTTC CTGGAAACTG CCGGATCCAG
  W
  TCCAGTAACA ATCACTGTTG ATGGAGAAGC CAGTAACAGT GCAGGTAAGG GAGAGTGTCT
  GAGAAGGTCT CACCAGGCTA GGTCCTGACT CCTGAAGCTG                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss47309460	NES11396313	PERLEGEN	MM_PANEL2	f	SNP	T	A	A	A	T	A	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs33529529					SNP	T	A	A	A	T	A	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47309460	NES11396313	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114160248 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv3-3	immunoglobulin heavy variable V3-3	within coordinates
Tssr118065	transcription start site region 118065	296 bp downstream