rs33529707 SNP Detail

Summary

• ID
  rs33529707
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:174134895 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCGCCTGATT CATGGAACCT
  ACACGACACC AGAATTAGCC CCAACAAGTT GTCTTCTGAC CTACGCGTGA ATGCACGCGT
  GCGCGCATAC ACTCACCCGA GCACACACAC ACACAACTAA GAGGGGAGGG AAAAGATCCT
  TTCCTAGTGT AGAGTTGTAA TGTGGGACCA TTAGAAACCT CACTCCTAGT AGGGTAAGGC
  M
  CCAGGCCAGG CACTCACCAA TTGTGTCAGA CATGTATCGA GGCAGCCAGA TCACCAACAT
  CAACAGGCAC CAGACAGTGA AACCCAGTAA GGTGACTCCA AGCCAACTTG TCCACTCATC
  ACCTCCATCT CTTAACCATT CTGGACTCCC CAAGTCCTTT GGCCAGGCCA TACAGTTACC
  TTCTGCTACA GGCCCTCTTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss45289526	mCV24952579	ABI	CRAMUS_MOUSE	f	SNP	A	C
ss148341334	ENSMUSSNP3239290	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C
ss320627367	CHEV_2_174118603	CHEVERUD	SCREENING_POP	f	SNP			A	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs33529707					SNP	A	C	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:174134895 () rs orientation: forward

Symbol	Name	Function Class
Gm56458	predicted gene, 56458	1969 bp upstream
Gnas	GNAS complex locus	within coordinates
Gnasas1	GNAS antisense RNA 1	within coordinates
Rr374311	regulatory region 374311	1198 bp upstream
Rr572094	regulatory region 572094	1122 bp proximal
Tssr22102	transcription start site region 22102	1650 bp upstream
Tssr28008	transcription start site region 28008	1056 bp downstream