rs33529774 SNP Detail

Summary

• ID
  rs33529774
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:84825979 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AACCCACCTG AAGGAGCCCC CGAGAGCCAT TCGTGTTCAA
  GTCAGGCTGA GCCCTTGGAA GGGCATGAGT TCAGAAAGCA CATATAGTCT GAACAAAGAC
  S
  AGACCTATGC AGACATGCAT TCATTCAAGA CTTTTAAAAA GTATGCTGGC AGTAGAACCC
  AGGGCCTTTC TCATGCTAGG CTGGTACTCA AACCTCATC                       
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46287118	mCV23392748	ABI	CRAMUS_MOUSE	f	SNP		C	C					G
ss60642556	NES16272414	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	C	C		G	C	G	C		G	C	C	G		C
ss145371938	ENSMUSSNP3255722	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
ss322747575	CHEV_8_86623249	CHEVERUD	SCREENING_POP	f	SNP													C					G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33529774					SNP	C	C	C	C	C	C	C	G	G	C	G	C	C	G	C	C	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60642556	NES16272414	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84825979 () rs orientation: forward

Symbol	Name	Function Class
Dcaf15	DDB1 and CUL4 associated factor 15	Intron
Gm39210	predicted gene, 39210	within coordinates