rs33531422 SNP Detail

Summary

• ID
  rs33531422
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:10660151 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTACATTGC TTGTCCAGGA
  CCTGTCAGGT CGAGGAAGAA GCCTGTTTAG ACAAGTTGTC AGGTTGAACA AGAGAGAGGA
  AAAATCCTAA ATCAGTGTGC TTGTCCATGC ACTTACACAT GGGCTAATTT TTCTGGGGCC
  ATGTTTTAGC CTTCGAGTTT GGCATAAAAG TAGTCAGAGT GTGGGGCTAA GAGCTGGGTG
  R
  TTATCAGAGT GGTTTTTGTT GGGAGACAGG CAACACAGTT ATTTCATAGT AATCATTGTC
  ATTTATACCT GTACACACAA TTGTGTGTGT GTGTGTATGT GTGTGTGTAT GTGTGTGTGT
  ATGTGTGTGT ATGTGTGTGT GTGTGTGTGT GTGTGTGTGT TGGGGGGGGG TGACTAAAGA
  AAAGGCTCTG TGTAGATGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46824600	NES10968695	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33531422					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46824600	NES10968695	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:10660151 () rs orientation: forward

Symbol	Name	Function Class
DXMit102	DNA segment, Chr X, Massachusetts Institute of Technology 102	54 bp proximal