rs33533013 SNP Detail

Summary

• ID
  rs33533013
• Variation Type
  SNP
• Alleles
  A/G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114158236 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCTTCTGAC CTTAAATTTG TTGCATTGGT GATGAGAGAC
  ATTTATCCTG TGTTATGACT TTCTAACATT TATATCTCTG TTTTTATGAA AATAACTTTT
  D
  TTCTTTCAAC GATTTTTGGA TCAGTATTAT CCAGAAATTT TAGTCATTTG ATGTATATAT
  TATCCCCTGG ACAAGGAAGG ATATCCTTGG TGGAGTCAA                       
  
  D = A/G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss47309409	NES11396401	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G		A	G	A		G
ss324180996	CHEV_12_115432827	CHEVERUD	SCREENING_POP	f	SNP						A				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	CAST/EiJ	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33533013					SNP	G	G	G	A	G	A	A	G	A	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss47309409	NES11396401	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114158236 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv3-3	immunoglobulin heavy variable V3-3	1823 bp downstream