rs33533116 SNP Detail

Summary

• ID
  rs33533116
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:18761054 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTCAATTTAC CAACAGCATC TCTTCCATTC AACTCTGAGG
  GTTAAACGAA GCTGAAGAAA CACAGGACTT GGCAGGGCAG GAAGCCACCA TCAGTCTACA
  Y
  GGCTTTGAGT TGAAAAGGCT GACCAATCCT CAAGACATTT TATTTCCATT GGCACACCTT
  GTTGTAATAA TATTATTTTG TTAAAATAAG ACACTTGAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45290130	mCV23542717	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss146310343	ENSMUSSNP4460805	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33533116					SNP	C	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:18761054 () rs orientation: forward

Symbol	Name	Function Class
Gm3363	predicted gene 3363	within coordinates
Rr552354	regulatory region 552354	103 bp distal
Rr552355	regulatory region 552355	within coordinates
Rr552356	regulatory region 552356	96 bp proximal