rs33535264 SNP Detail

Summary

• ID
  rs33535264
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:49450534 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCCACTAA CTACTCCCAC
  CTTGTTCCAA CTAACCCTCC CCCTTCTTCT TTCATGGGTG TTTTCATGCA TGTGTGTGAT
  CCAATACGTT CCATCAGGGA TACCTACAGG AACATGGGTG AGGGGCAAGG ACTAGTTTCA
  TTCTTCTCTA GATAGGCACG CAGCTTTCCC AGGACCATTT GTTGAGGGGG CTATCTTCTC
  Y
  CTGGGGTGTG TTTTGGTGCG GGTCTATACC CAGTCTTCTG GTCTGTTCTC TTGCTCTGTA
  TGTCTTTGCT CATGCCAGCA TCAAACTGTT TGTTTGTTTG TTTGTTTGTT CCAAGGTAGG
  GTTTCTCTGT ATAACCCCGG CTGTCCTGGA ACTCACTTTG TAGACCAGGC TGGCCTTGAA
  CTCAGAAATC CACCTGCCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45290155	mCV25134303	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	T	T
ss146524065	ENSMUSSNP3867966	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33535264					SNP	C	C	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:49450534 () rs orientation: forward

Symbol	Name	Function Class
Gm74675	predicted gene, 74675	1984 bp upstream
Tssr17675	transcription start site region 17675	1976 bp upstream