rs33535807 SNP Detail

Summary

• ID
  rs33535807
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:19426945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTGTATAAT TATGATGCTG
  TAATTATATT CACATGGATT TGTGGTTCTT GGGAGGGAAC ACATAGCTGT AGAAGATATA
  CTGCTGCTGA AATGATTTTC ACTGTTTATT TATGATACAG TATGTTTTAC TCAGACAGTG
  TTAACAGTCA GATAAAGTGA ACTGTTGATA GAATTGTTGA AAATGTTTAC TACACTATAA
  R
  TTGCTTCTGT TACTAGAAAA TCCACATTTG TTACATTCTG CTGAAAAAGT GTTTTTTCAC
  AAGTTAGGTG GTGTACTGGC TAGTTTTGTG TCAACTTGAC ACAGGCTGGA GTTATCACAG
  AGAAAGGAGC TTCAGTTGGG GAAATGCCTC CACAAGATCC AGCTGCAAGG CATTTTCTCA
  ATTAGTGATC AAGGAGGGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	PWD/PhJ
ss46825294	NES10845119	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	PWD/PhJ
rs33535807					SNP	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46825294	NES10845119	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:19426945 () rs orientation: forward

Symbol	Name	Function Class
Gm42188	predicted gene, 42188	1398 bp upstream