rs33537145 SNP Detail

Summary

• ID
  rs33537145
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:133462698 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAAAAAAA AAAAAAGAGT
  TGTCATGGTC ATGATGTCCC TTCACAGCTA CAGAACACTA ACTAAGATTA AGTATAAATA
  TAAATGTGAA TATAAATGCA TGCAATAACA ACTAGTGAAA GTGAGTTCAC AGAGAAAGCC
  TGCCTCTGCC TCCTGAGTAC TAGAATTAAA GGTATGTGCC ACCACACCTG GCTCTATTTT
  S
  AATAACTAGG ACTGAAAATA TTAATTTTGG AACCCACAAT CATTCTGACA GGTCCACAAA
  TAAATTAAGA AGTAAATGCA ATGAGTAGAT TGTACCCTTT CCCCAATCTC CTATTTTATT
  TTATTTTATT TTATTTTATT TTACTTGTGA TATGGAGGAT CAACCTGGGG CCTTAATCAT
  AGACAAATGC TGCATCACTG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss49497844	NES12881067	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33537145					SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49497844	NES12881067	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:133462698 () rs orientation: forward

Symbol	Name	Function Class
Gm71008	predicted gene, 71008	within coordinates