rs33538862 SNP Detail

Summary

• ID
  rs33538862
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:47445090 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGACTTAT TCGGGTGAAC
  TAGAGATTAA ATACCTTTTG CAAGAAGGGA TGCATAGGAA GAGAGACTCA TTGGCTAAAC
  ACTCAGGGCC TCTATAGACC CCTTATTATC ATGGAGAACT CTAAGTTCTA TGCTACATGA
  CCAGTTGTCA ATGTTCTTAG TGAGATGTTA TGGTCACATG TTCCAGGCCA TGGATCTGAC
  Y
  GGAACCTTAT CTGAACTCCT GCCATTTTCA ATTCTGAGTT TTACTGGGGT TCTGAACTTT
  CCTACTACAT TACTGGTTCT TCTGTCTGGT GACATGGTCT ACTGCCCCAA AGAAATGTTC
  CTAAGGAAAC CCCTATCCCT ATGTCTTTAT TGGTGAAATA ACTTGGCACA GGTATTTGTG
  GATTTTAAAC TTAAAAGTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J
ss45291207	mCV25125649	ABI	CRAMUS_MOUSE	f	SNP	C	C	T
ss146510153	ENSMUSSNP1774403	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J
rs33538862					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:47445090 () rs orientation: forward

Symbol	Name	Function Class
D2Ucl22	DNA segment, Chr 2, University College London 22	1766 bp proximal