rs33542634 SNP Detail

Summary

• ID
  rs33542634
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46739948 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTGCCCAA TGAGCAGCCA
  CAACTCAAAC GGGCTCAAAG CTGAATAGTG GGCAGGGCTG GTGGAGGGGC GGGGCATATC
  AGCGGGCTCC TATAGTTGCT GCTTGGACTA AGCTATCTCA TGAAGAACCA TGAGCTGGAC
  TTGTCCGCGT TGTCAGCAAC CCGTTTACTT TGGTAAGGCT GGGACCTAGG AGGAGTAAAG
  R
  CAACCTTGAG CCCCCGGGTC CCCTGTATTT GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT
  GTGTGTGTGT GTGTGTGTGT CTCTCGCGCG CGCTTGCGCT TGAAAACAAA GTGCCTGCCA
  CACCTCCAAG AGCCCAAGCA AGAGACACCA GGGTGGGATG GAGCTTCTTC CTGGAAACAA
  TATTCATTGT CTCCAGGGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
ss39548676	mCV23183631	ABI	CRAMUS_MOUSE	f	SNP	A	A	G	G
ss145699436	ENSMUSSNP3324793	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	DBA/2J
rs33542634					SNP	A	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46739948 () rs orientation: forward

Symbol	Name	Function Class
Crip3	cysteine-rich protein 3	within coordinates
Rr527733	regulatory region 527733	61 bp distal
Rr527734	regulatory region 527734	within coordinates
Tssr144853	transcription start site region 144853	93 bp downstream
Tssr144854	transcription start site region 144854	73 bp downstream