rs33544085 SNP Detail

Summary

• ID
  rs33544085
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:28044136 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCAGA TTGCCCACAG CCACTGGCTA
  M
  TGACTAGGAT TTGCTTCATG CAGGG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39548787	mCV23708306	ABI	CRAMUS_MOUSE	f	SNP	A	A	C	A
ss145419799	ENSMUSSNP3758865	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss325349851	CHEV_17_27962107	CHEVERUD	SCREENING_POP	f	SNP					C	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33544085					SNP	A	A	C	A	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:28044136 () rs orientation: forward

Symbol	Name	Function Class
Gm65125	predicted gene, 65125	1059 bp downstream
Rr405125	regulatory region 405125	1040 bp upstream
Tssr143360	transcription start site region 143360	67 bp upstream
Tssr143361	transcription start site region 143361	117 bp upstream
Tssr147072	transcription start site region 147072	875 bp downstream
Tssr147073	transcription start site region 147073	1762 bp downstream