rs33546165 SNP Detail

Summary

• ID
  rs33546165
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:23619614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTTG TCAGACTCCC ACAAACGGCA
  M
  TCAAAGTTCT CATTGCAGTG TTTCT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss45792214	mCV23736136	ABI	CRAMUS_MOUSE	f	SNP	A	C	A
ss148057211	ENSMUSSNP6237003	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	C	A
ss321488913	CHEV_5_22920434	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs33546165					SNP	A	C	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:23619614 () rs orientation: forward

Symbol	Name	Function Class
5031425E22Rik	RIKEN cDNA 5031425E22 gene	within coordinates
Gm57286	predicted gene, 57286	1913 bp downstream
Rr377698	regulatory region 377698	within coordinates
Rr608092	regulatory region 608092	1095 bp distal
Rr608093	regulatory region 608093	within coordinates
Rr608094	regulatory region 608094	926 bp proximal
Rr608095	regulatory region 608095	1330 bp proximal