rs33555045 SNP Detail

Summary

• ID
  rs33555045
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:117232614 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGACC CACTGTCCTC ACAGACAAGT
  M
  TGTTGGGATG TAGGAAGGTG GAGTA                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45793586	mCV23796460	ABI	CRAMUS_MOUSE	f	SNP	C	C	A	A
ss149148123	ENSMUSSNP4855819	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C		A
ss321658427	CHEV_5_117544558	CHEVERUD	SCREENING_POP	f	SNP					A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33555045					SNP	C	C	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:117232614 () rs orientation: forward

Symbol	Name	Function Class
Rr618554	regulatory region 618554	within coordinates
Rr618555	regulatory region 618555	54 bp proximal
Rr618556	regulatory region 618556	1848 bp proximal
Suds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	Intron