rs33555292 SNP Detail

Summary

• ID
  rs33555292
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:103754146 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTATC CCCAGACACA TCACACCAGG
  S
  TACTCACCCA GAAACGTAGC AGACG                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss46827572	NES10713310	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	G	C	G	C	C		C	C	C	C		C
ss135564772	ENSMUSSNP5945765	ENSEMBL	ENSEMBL_Sanger	f	SNP		C				G
ss320858681	CHEV_3_103650753	CHEVERUD	SCREENING_POP	f	SNP									C					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33555292					SNP	C	C	C	G	C	G	C	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46827572	NES10713310	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:103754146 () rs orientation: forward

Symbol	Name	Function Class
Bcl2l15	BCLl2-like 15	within coordinates
Tssr31007	transcription start site region 31007	12 bp downstream
Tssr31008	transcription start site region 31008	5 bp upstream
Tssr31009	transcription start site region 31009	27 bp upstream
Tssr31010	transcription start site region 31010	64 bp upstream