rs33559788 SNP Detail

Summary

• ID
  rs33559788
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26485035 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAGGC TAAGGCAAGA AGACTGTGAG
  W
  TCAAGGCCAG TCTGGAATAC ATACC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss39550925	mCV25263391	ABI	CRAMUS_MOUSE	f	SNP	A	T	A
ss145398324	ENSMUSSNP329907	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33559788					SNP	A	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26485035 () rs orientation: forward

Symbol	Name	Function Class
Gm50013	predicted gene, 50013	1334 bp downstream
Luc7l	Luc7-like	within coordinates
Rr329961	regulatory region 329961	835 bp distal