rs33560083 SNP Detail

Summary

• ID
  rs33560083
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:134678793 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGAA AATTATCTAA AGCTAGAAAC
  R
  TTATGACTTG AGAGAGAAAA GACAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss45293910	mCV27542883	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss147637373	ENSMUSSNP1032555	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G
ss320514834	CHEV_2_134662609	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33560083					SNP	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:134678793 () rs orientation: forward

Symbol	Name	Function Class
Plcb1	phospholipase C, beta 1	Intron
Rr565690	regulatory region 565690	638 bp distal
Rr565691	regulatory region 565691	473 bp distal
Rr565692	regulatory region 565692	1391 bp proximal