rs33564072 SNP Detail

Summary

• ID
  rs33564072
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:129979300 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  ACAAAACATC AGATTCAAAG AGAAACATCC AGGAGCTTCA AATTAGGGGG ACAAAAGCAT
  AGCTTCTTTA TAAAAAGGCT CCAAGTAAGT ATATCTATTA CACAATATAG AAAGCAGAAT
  ATAATGGGAC ACCTAAGGGA AGAATAACAG CTAACCTGAA TATATTCGTT GTTAGGAAAT
  GTTTCGCTTG CCTTTTTACC TTCTGTCTCT TTCTACTCTC TACTTTATTT TAGTAATATT
  TTTATTTTAC CTTACCCAGC AGAATTTTGT CCAGTTTTTA TTATTTTTTT AAAAATATAC
  Y
  CACATTTGGG TGCTGGAGAA ATGACCAAAA AGTTAAGAAT AGTTGCTGAT CTTTCAGAGG
  GCCTGTGTTC TGTTCTCAGC ACCCAAATTA AGAAGCTCAA TGTGGGGGTG ACCTCTTACT
  GCGTTCTCAC GGCTCTTTCT GTTTGTGAGA CCTGTGGCTC GACCCTGCTG ATAGCAAGAT
  GTCTTCAGGA AATGCAAAAA TTGGGTATCC TGCTCCCAAC TTCATAGCTA CAGCTGTTAT
  GCCAGATGGA CAATTCAAAG ATATCAGCCT ACGTGAATAC AAAGGAAAAT ATGTTGTGTT
                                                                   
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss46291407	mCV24003257	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33564072					SNP	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:129979300 () rs orientation: forward

Symbol	Name	Function Class
Gm21399	predicted gene, 21399	179 bp upstream
Gm64945	predicted gene, 64945	within coordinates
Tssr2751	transcription start site region 2751	100 bp upstream
Tssr2752	transcription start site region 2752	131 bp upstream
Tssr2753	transcription start site region 2753	402 bp upstream