rs33564431 SNP Detail

Summary

• ID
  rs33564431
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:80545369 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACGAAAACCT ACTTGGTAAT
  GTTGGGCAGC CTAGAGTTCC TAAAAGCTTA CCTAAAATAA TACTTTTTTT TTTTTTTTTT
  TCGAGACAGG GTTTCTCTGT GTAGCCCTGG CTGTCCTGGA CCTCACTTTG TAGACCAAGC
  TGGCCTCGAA CTCAGAAATC CACCTGCCTC TGCCTCCCGA GTGCTGGGAT TAAAGGCGTG
  Y
  GCCACCACAC CCGGCAAAAT AATACATTCT TGACTGAGGT GTCTGGTGTG TGGGGAGGCT
  GTGACCCATG TGACAGAGGC TCTGGGAACT GACCTCAGGT CACCTGGAAG AGCAGCAAGC
  GCTCCTCACT CTGAGCCGCC CCGCCCAGAG CACAGGCTCG AAAATGTACA AGCAGAGAGT
  GAGACCCCGA GGATTGTTCT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J
ss39550985	mCV22823662	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss146071243	ENSMUSSNP301024	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J
rs33564431					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:80545369 () rs orientation: forward

Symbol	Name	Function Class
Dhx57	DExH-box helicase 57	364 bp downstream
Rr405469	regulatory region 405469	717 bp downstream
Rr405470	regulatory region 405470	147 bp downstream