rs33565756 SNP Detail

Summary

• ID
  rs33565756
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:11309815 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTTGAGAG AGAAGAAAGA
  GGAATTGTCT CCATTCACAG AATATTCCTT AGAGAATCCA TCCCAGGCAT CATTTTCTCC
  AACAGACGTT TCCCACCTGC GCACATGTAC CTGTGTGTCT GCTTGCACAT GCACGAGCAA
  AGTCATATTT ACACAGAGTC ACACTCACAC GGGTGTGTAC ATACAGAAGC ATATGTGTCA
  Y
  CACGGGGACT GAACTGCTTG GCTTACATTA CACTATCAAA GGACACAACA GTGTTGGTAG
  GGAAGCCACA GACCTACCCT GGTGGCTTTA TCTGCAGCCA TTCCTTGTGG AGAACCCATC
  GTTCTTCCCC GCTGGCGGGC CTGAGCAGAA GTTGTCTGCA GATGTCAGTG TTAATGCCTT
  GATAAACAGG GAGCTTGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss46829734	NES10963329	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs33565756					SNP	C	C	C	C	C	C	T	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46829734	NES10963329	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:11309815 () rs orientation: forward

Symbol	Name	Function Class
Rr2650	regulatory region 2650	within coordinates
Rr9046	regulatory region 9046	within coordinates