rs33566314 SNP Detail

Summary

• ID
  rs33566314
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:84374555 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGCACCTAG GAAAACACAG ACAGGGATTG AGCTGGAAAG
  ACACATAGAT GGAGGAAAAA AAAGAAAAGA TGGATGGAGA AAAAGAAAAA AGTCAGAGCA
  W
  CCAGTGCGTC TGCACTCAGG CAGACAAGGC CAGGCAGAGG TTGCCGGCAG AAGACACGGA
  GGCCCACGGT GGCAGAAGAC GCTGAATCGC CCTCTGTTC                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39551000	mCV23107690	ABI	CRAMUS_MOUSE	f	SNP	T	T	T	A
ss146129394	ENSMUSSNP116960	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33566314					SNP	T	T	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:84374555 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9563	CpG island 9563	within coordinates
Gm35551	predicted gene, 35551	within coordinates
Gm65795	predicted gene, 65795	33 bp downstream
Rr531970	regulatory region 531970	within coordinates