rs33567049 SNP Detail

Summary

• ID
  rs33567049
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84469338 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGTA GCCTAGGATG GCACTGAACT
  Y
  CTGACTTCCT GTCTCCAAAG CCTAA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46291728	mCV23004529	ABI	CRAMUS_MOUSE	f	SNP	C	T	C	T
ss322745691	CHEV_8_86266608	CHEVERUD	SCREENING_POP	f	SNP					T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33567049					SNP	C	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84469338 () rs orientation: forward

Symbol	Name	Function Class
Adgre5	adhesion G protein-coupled receptor E5	1526 bp upstream
Cpgi20655	CpG island 20655	1019 bp distal
Gm46046	predicted gene, 46046	within coordinates
Rr666301	regulatory region 666301	1449 bp distal
Rr666302	regulatory region 666302	1340 bp distal
Rr666303	regulatory region 666303	530 bp distal
Rr666304	regulatory region 666304	within coordinates
Tssr2620	transcription start site region 2620	1412 bp downstream
Tssr2621	transcription start site region 2621	144 bp downstream
Tssr78297	transcription start site region 78297	1275 bp downstream
Tssr82052	transcription start site region 82052	1519 bp upstream