rs33567069 SNP Detail

Summary

• ID
  rs33567069
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:90406027 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AAATGAATCA ACAGCTAAGT CAGGCTTATT CAAACACAAG
  ACATAATGTA ACTTCTGCTT ATGAGTTACA TGGTCAACAG AGTGAAATGA TCCTCAGATT
  W
  ATATATTTGT AAACAACACA TATGACAAAA GGCTGTTACT CAAAATATGC AGAAGATTCT
  TGAAACTCAA TGATAAAAAA GTAATACTCA AATAATAGG                       
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39551016	mCV23555095	ABI	CRAMUS_MOUSE	f	SNP	T	T	A	T
ss146208340	ENSMUSSNP3221415	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss325509255	CHEV_17_90497939	CHEVERUD	SCREENING_POP	f	SNP					T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33567069					SNP	T	T	A	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:90406027 () rs orientation: forward

Symbol	Name	Function Class
Nrxn1	neurexin I	within coordinates
Rr336618	regulatory region 336618	1774 bp proximal