rs33567191 SNP Detail

Summary

• ID
  rs33567191
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:87742772 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTAACTTCT CGCCAAGGTT
  TGTCATCACA TGGCGAAGCT CTGCTGCACT AATATAGCCA TTGCCATCCT ACAACAAAGT
  GGGAGGATGA TGTCTGAGTA ATACGTGAAT TCCTACATTA ATGAACAATT TCATGTTACA
  AAAGTAGACT CTAGAAATTT CTATCAAGTG GAGGCAGAGG CAGGTGGTTC TCTGAGTCTG
  Y
  AGCAGCCTGG TCTACAGGGA GTTCCAGGGC AGACAGGACT ACACAGAGAA ACCCTGTCTT
  GGGTGGATTT TTTTCACACA AAGTGAAGAG AATCCACACT ACCTGATCTG TAAATGTCAT
  TAAGTAGTCT GTCTCCAGCT ACTACTCCCT GCCTCCAAAG GCACATGACA TATGCATCCT
  CTGCAGTAAG TTTACACGGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss39552229	mCV22771356	ABI	CRAMUS_MOUSE	f	SNP	C	T	T	T	T
ss146179881	ENSMUSSNP1227941	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33567191					SNP	C	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:87742772 () rs orientation: forward

Symbol	Name	Function Class
Calm2	calmodulin 2	within coordinates
Tssr149769	transcription start site region 149769	1394 bp upstream