rs33569521 SNP Detail

Summary

• ID
  rs33569521
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:57547074 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTTATGGG ATAATCTCCC
  ATCTCAAGAT TCTTAACCAC ATCTTTAACG TCCCCTTTGT CATGTACAGG GACACTCACA
  GGTGCCCGGG ATTAGGATTT AAACACCCTG TGGTGGGGCA TTACTCTGTT CCCATATCAC
  AAATGGTACT TTTGATCAAC CTACTTTTGA CCCTCCCCTT CACAGATTAC TGTTTGAGCA
  Y
  AAACTACCAT GTTATTATGC CTATGGCATT AGGTTCCATA GTGAAGCAGA AGCAATAGAG
  TGCAGCCATG ATACAAGGGG CTTCATTGGA TTGTCTTACA TGATAGTGAA TAGTCCAAGA
  GTCTGCCCAA TCCAAGAAGC TGGATACAGC AGTCATAATC TGTGCTTAAG GCTGGGAGCT
  CCCTGGAGAA CTGCTTGCAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss49501378	NES12657872	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs33569521					SNP	C	C	C	C	C	C	C	C	C	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss49501378	NES12657872	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:57547074 () rs orientation: forward

Symbol	Name	Function Class
D15Dcr1	DNA Segment, Chr 15, Derry C. Roopenian 1	1187 bp proximal