rs33569586 SNP Detail

Summary

• ID
  rs33569586
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:142908142 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCAA AATAGGACCT CCACACGTAT
  M
  CCTGGGCATC CAGAACCCAC AAACG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45795014	mCV23734249	ABI	CRAMUS_MOUSE	f	SNP	A	A	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33569586					SNP	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:142908142 () rs orientation: forward

Symbol	Name	Function Class
Gm72722	predicted gene, 72722	1082 bp downstream
Rr368006	regulatory region 368006	1400 bp downstream
Rr624054	regulatory region 624054	1371 bp distal
Rr624055	regulatory region 624055	638 bp distal
Rr624056	regulatory region 624056	within coordinates
Rr624057	regulatory region 624057	1150 bp proximal
Tssr49610	transcription start site region 49610	1376 bp downstream