GCAGCTGTTG TCAAAAACGT AGGTGTCATG AATATTGGTC TTAGTGTGGC ATCTTGGGCC CGATTACAAA GGCAAGTGTA GTTTACTTTC TGTAGTTTAC TTTTCTGCAA AGTGCCGGGA CAGGGCGGTA CCTTCTTTAA GGACATTTCT GTTCTTTAGA GAAATGATAT GAAAAGCCGA AGGGAAAAAT CTGGAAGGAT R CAGAGAGGGA AGCCCATTTT AGCCACTGGG TGGCGATATT GTCCCACGTC GTGGAAGGTT TTTTTGTCCC ATTCGCCATT CGCCAACCGT TCCAAACTTT GAATTAACTA AGCATAGTCA AGGAAGATTT TCAAAAGGGA GCTGAAATAA AAGCAGGTCG GCAGAAAACC ACAATTACAG GGGAATGACA GTAAAGGGCA R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
---|---|---|---|---|---|---|---|---|---|---|---|
ss39551700 | mCV22963889 | ABI | CRAMUS_MOUSE | f | SNP | G | A | G | G | ||
ss145044567 | ENSMUSSNP5544384 | ENSEMBL | ENSEMBL_Sanger | f | SNP | G | A | G | |||
ss325286858 | CHEV_17_3571042 | CHEVERUD | SCREENING_POP | f | SNP | A | A | ||||
SNP Consensus Information | |||||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
C57BL/6J |
DBA/2J |
LG/J |
SM/J |
||||
rs33570279 | SNP | G | A | G | G | A | A |
Location: Chr17:3621317 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm34155 | predicted gene, 34155 | within coordinates | ||||||
Gm65020 | predicted gene, 65020 | 9 bp upstream | ||||||
Rr331141 | regulatory region 331141 | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/10/2024 MGI 6.24 |
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