rs33570279 SNP Detail

Summary

• ID
  rs33570279
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:3621317 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCAGCTGTTG TCAAAAACGT
  AGGTGTCATG AATATTGGTC TTAGTGTGGC ATCTTGGGCC CGATTACAAA GGCAAGTGTA
  GTTTACTTTC TGTAGTTTAC TTTTCTGCAA AGTGCCGGGA CAGGGCGGTA CCTTCTTTAA
  GGACATTTCT GTTCTTTAGA GAAATGATAT GAAAAGCCGA AGGGAAAAAT CTGGAAGGAT
  R
  CAGAGAGGGA AGCCCATTTT AGCCACTGGG TGGCGATATT GTCCCACGTC GTGGAAGGTT
  TTTTTGTCCC ATTCGCCATT CGCCAACCGT TCCAAACTTT GAATTAACTA AGCATAGTCA
  AGGAAGATTT TCAAAAGGGA GCTGAAATAA AAGCAGGTCG GCAGAAAACC ACAATTACAG
  GGGAATGACA GTAAAGGGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39551700	mCV22963889	ABI	CRAMUS_MOUSE	f	SNP	G	A	G	G
ss145044567	ENSMUSSNP5544384	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A		G
ss325286858	CHEV_17_3571042	CHEVERUD	SCREENING_POP	f	SNP					A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33570279					SNP	G	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:3621317 () rs orientation: forward

Symbol	Name	Function Class
Gm34155	predicted gene, 34155	within coordinates
Gm65020	predicted gene, 65020	9 bp upstream
Rr331141	regulatory region 331141	within coordinates