rs33570312 SNP Detail

Summary

• ID
  rs33570312
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:27997433 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTGTG GGTTCAATCA GGCGCTCCAG
  S
  TTGGTGGCTA GTGGAAGCAC CTTTA                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39552182	mCV25269730	ABI	CRAMUS_MOUSE	f	SNP	C	C	G	C
ss145419287	ENSMUSSNP399515	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	G
ss325349547	CHEV_17_27915404	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33570312					SNP	C	C	G	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:27997433 () rs orientation: forward

Symbol	Name	Function Class
Ilrun	inflammation and lipid regulator with UBA-like and NBR1-like domains	within coordinates
Rr330146	regulatory region 330146	1968 bp proximal
Rr340954	regulatory region 340954	1233 bp distal
Tssr147065	transcription start site region 147065	511 bp upstream