TTTTC AGTAACTACT GTCTTGAATT Y CACTTTCCAA CCTCTGTAAT GTGGG Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss46292814 | mCV22996280 | ABI | CRAMUS_MOUSE | f | SNP | T | T | C | T | |||||||||||||||
ss51965897 | NES14985079 | PERLEGEN | MM_PANEL2 | f | SNP | T | C | T | T | C | T | C | T | T | T | C | T | C | C | T | ||||
ss145180461 | ENSMUSSNP230436 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | T | |||||||||||||||||
ss322710291 | CHEV_8_75615528 | CHEVERUD | SCREENING_POP | f | SNP | T | T | |||||||||||||||||
SNP Consensus Information | ||||||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
129X1/SvJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
C57BL/6J |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs33575379 | SNP | T | T | C | T | T | C | T | C | C | T | T | T | T | C | T | C | C | T | T |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51965897 | NES14985079 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr8:73818257 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
B930093H17Rik | RIKEN cDNA B930093H17 gene | 453 bp upstream | ||||||
Large1 | LARGE xylosyl- and glucuronyltransferase 1 | within coordinates |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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