rs33579777 SNP Detail

Summary

• ID
  rs33579777
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:32903741 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCAA ACAATGCCTT CTGGGTATGG
  Y
  AGGACCTCTG CTCTAGTGAG CTCAC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss39553011	mCV24378324	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss145473603	ENSMUSSNP2180827	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss325362839	CHEV_17_32821712	CHEVERUD	SCREENING_POP	f	SNP				C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33579777					SNP	T	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss159833491	UOL_MMUSEQ_2052	UOL_CGR	Mmu17_30637692_36837814	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:32903741 () rs orientation: forward

Symbol	Name	Function Class
Cyp4f15	cytochrome P450, family 4, subfamily f, polypeptide 15	864 bp upstream
Rr339615	regulatory region 339615	859 bp proximal
Tssr143733	transcription start site region 143733	818 bp upstream
Tssr143734	transcription start site region 143734	843 bp upstream
Tssr143735	transcription start site region 143735	872 bp upstream
Tssr143736	transcription start site region 143736	888 bp upstream
Tssr143737	transcription start site region 143737	1326 bp upstream