rs33580194 SNP Detail

Summary

• ID
  rs33580194
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:23292577 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTTCT CCTAATCTTT CATCCATGTA
  R
  TGCAAACAGC CACAGCCAGT AAAGC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss46293395	mCV24527381	ABI	CRAMUS_MOUSE	f	SNP	G	G	A
ss148843633	ENSMUSSNP231426	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
ss322527917	CHEV_8_23913033	CHEVERUD	SCREENING_POP	f	SNP				G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs33580194					SNP	G	G	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:23292577 () rs orientation: forward

Symbol	Name	Function Class
Ap3m2	adaptor-related protein complex 3, mu 2 subunit	within coordinates
D8Dcr5	DNA Segment, Chr 8, Derry C. Roopenian 5	447 bp distal
Rr381798	regulatory region 381798	582 bp upstream
Rr660722	regulatory region 660722	472 bp distal
Rr660723	regulatory region 660723	642 bp distal
Tssr80611	transcription start site region 80611	1322 bp downstream