Gctctgctc tctctctctc tctctctctc tctctcacac acacacacac acacacacac acaATGTCAA GGGTGTGGAG GGTCACCTGG CTCCTTTTCT GGGATGCGTT AATCTGTGCT TTTCAATCTT CCCCATGCGT TCATAAGCGC R CAGCTGTTCT ATATTAGATC TGGTTAGGAT CCATTGGAGT GCGTATGGGT TTTTCTTCCT TGAGAAAAAT CAAGACAGTG AGCCTGTCGG CCTTTTACAA GGCCTGTTGG AGAATGTTTT CAAAGGAGAG TGACAGACAT ATTGCTGATG R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss49503771 | NES12860852 | PERLEGEN | MM_PANEL2 | f | SNP | A | G | G | G | G | A | A | G | A | A | G | A | A | A | ||
ss145558963 | ENSMUSSNP2780672 | ENSEMBL | ENSEMBL_Sanger | f | SNP | A | |||||||||||||||
ss319996189 | CHEV_1_138473933 | CHEVERUD | SCREENING_POP | f | SNP | A | G | ||||||||||||||
SNP Consensus Information | |||||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
LG/J |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
SM/J |
WSB/EiJ |
||||
rs33585462 | SNP | A | G | G | G | G | A | A | G | A | A | A | G | A | A | G | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss49503771 | NES12860852 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr1:136505094 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
4933409D19Rik | RIKEN cDNA 4933409D19 gene | within coordinates | ||||||
Gm33994 | predicted gene, 33994 | within coordinates | ||||||
Gm57131 | predicted gene, 57131 | within coordinates | ||||||
Rr419471 | regulatory region 419471 | 587 bp proximal | ||||||
Rr419472 | regulatory region 419472 | 1987 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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