rs33587751 SNP Detail

Summary

• ID
  rs33587751
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr16:90626808 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGGA TGTGTGGCTG TCATCCTCCT
  W
  GAATCTAGTG GTCCAGCTCT GAGAC                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss48331056	NES12197032	PERLEGEN	MM_PANEL2	f	SNP	A	T	A	A	A		A	A		T	A	A	T		A
ss148543116	ENSMUSSNP3968941	ENSEMBL	ENSEMBL_Sanger	f	SNP	A					T
ss325276371	CHEV_16_90830165	CHEVERUD	SCREENING_POP	f	SNP									A					T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs33587751					SNP	A	T	A	A	A	T	A	A	A	T	A	A	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48331056	NES12197032	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr16:90626808 () rs orientation: forward

Symbol	Name	Function Class
Cpgi8431	CpG island 8431	within coordinates
Eva1c	eva-1 homolog C	within coordinates
Rr519213	regulatory region 519213	449 bp proximal
Tssr139312	transcription start site region 139312	161 bp upstream
Tssr139313	transcription start site region 139313	196 bp upstream
Tssr139314	transcription start site region 139314	485 bp upstream
Tssr139315	transcription start site region 139315	910 bp upstream
Tssr139316	transcription start site region 139316	1209 bp upstream
Tssr139317	transcription start site region 139317	1295 bp upstream