rs33590423 SNP Detail

Summary

• ID
  rs33590423
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:95721443 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATAGG TCTCAGAGAA GGGTAGTGGG
  R
  GATAACTAGA CAAGGAGAAT TGGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46294419	mCV24609565	ABI	CRAMUS_MOUSE	f	SNP	A	G	A	A
ss145637882	ENSMUSSNP2174550	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G		A
ss322809828	CHEV_8_97518715	CHEVERUD	SCREENING_POP	f	SNP					G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33590423					SNP	A	G	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:95721443 () rs orientation: forward

Symbol	Name	Function Class
Adgrg1	adhesion G protein-coupled receptor G1	within coordinates
Tssr78942	transcription start site region 78942	1941 bp downstream
Tssr78943	transcription start site region 78943	1878 bp downstream
Tssr78944	transcription start site region 78944	488 bp downstream
Tssr78945	transcription start site region 78945	425 bp downstream
Tssr78946	transcription start site region 78946	382 bp downstream
Tssr78947	transcription start site region 78947	94 bp downstream
Tssr78948	transcription start site region 78948	26 bp downstream
Tssr78949	transcription start site region 78949	12 bp downstream
Tssr78950	transcription start site region 78950	25 bp upstream
Tssr78951	transcription start site region 78951	776 bp upstream
Tssr78952	transcription start site region 78952	868 bp upstream
Tssr78953	transcription start site region 78953	889 bp upstream
Tssr78954	transcription start site region 78954	935 bp upstream