rs33590622 SNP Detail

Summary

• ID
  rs33590622
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:86487833 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                                                   
  AACTACACAA ACAATTCAAA GTCTCTTTTG CTTTCCCAGG CCTCATAGAA CTCAAAGACA
  CACATTTGCG ATCACTTGGC CCTCAATGTG ATACTACTTT CTACAGAGTG TACTCAAGTC
  CTGCTATTTA AATTCTCCCT TCCCCCTGAA GGAAAGCAAG AGCACTTTTC TTTTCTTCTC
  TAATATAATT ATAATAAAAA AGTAAGATTA GTACCCAAAA TTCAAACAGA AGTAATATAT
  ATTGAACCTA TTCGTCTTTT CTATGAAGAA ACCAAAGTAG GTTTACATTA GAAGTGGATT
  K
  TCATGGCTAT ATTTCTATGC AACCTTTAAG AAAAACTGGT AACTATCTTT TCCCAGGTTC
  TTTCTATGGC ATCTTTTACA TCTTTATTCC TCAAGGTATA GATCAAGGGA TTCAACATTG
  GGATAACAAG TGTGTAAAAT ATGGAAGACA CTTTATCAGT CTCAAATGTT TGACTGGACT
  TGGGCTGCAC ATACATAAAT ATCAAAGTCC CATAGAAGAC AATGACCACA GTGAGGTGAG
  ACCCACAGGT TGAAAAAGCC TTGCATCTGC CTGCAGCAGA TTTCATCCTC AGAATAGTTA
                                                                   
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss45297796	mCV23002657	ABI	CRAMUS_MOUSE	f	SNP	G	T	G	T
ss146862882	ENSMUSSNP6848313	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T		T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs33590622					SNP	G	T	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:86487833 () rs orientation: forward

Symbol	Name	Function Class
Or8k38	olfactory receptor family 8 subfamily K member 38	mRNA-UTR