rs33593947 SNP Detail

Summary

• ID
  rs33593947
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:4467792 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATAATAAC CCCAAAACCA
  AAACCAAATG TGTAGAAAGG GCCATGATTG CATAGAGGAG CCAGATGTCT TTTTTCTATT
  GACATCAATA CTTGAAAACA TTATATGATT TTTGTAAAAT TTTTTTTTGG TTTTGCTTTT
  GAGATTCTTA GAAATCAATA GAGAGTCTTA AGCTATAGCC CAGGCTGGCT CCACCTCTTG
  K
  CAGCCCTCTT GTCTCAAGCT CACACATCCT GGGTTTAAGG TGTAGAACAA TTACACCTAG
  CTTAGGAGTT AGTATTTATG GGAAGAATGG TATTTTGTCT TTTTTTCCAA GACAGGGTCT
  CGGCTAGCTC CCGCTGCCCT TGAACTCATT GTATAGCCTA GAATGACTTC TTGATACCAC
  CTCTTGGAGT GCTCCATGAC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss46295290	mCV25172351	ABI	CRAMUS_MOUSE	f	SNP	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs33593947					SNP	G	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:4467792 () rs orientation: forward

Symbol	Name	Function Class
Tssr2482	transcription start site region 2482	1563 bp upstream