rs33596238 SNP Detail

Summary

• ID
  rs33596238
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:154579758 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATTAG GATTGGCTTA CAGTTTTAGA
  R
  GTTTAGTCCA TTATCATCAT AGCAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	LG/J	SM/J
ss45297567	mCV25182895	ABI	CRAMUS_MOUSE	f	SNP	G	A
ss148038415	ENSMUSSNP3301054	ENSEMBL	ENSEMBL_Sanger	f	SNP		A
ss320570996	CHEV_2_154563574	CHEVERUD	SCREENING_POP	f	SNP			A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	LG/J	SM/J
rs33596238					SNP	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:154579758 () rs orientation: forward

Symbol	Name	Function Class
Gm57835	predicted gene, 57835	within coordinates
Tssr26967	transcription start site region 26967	646 bp downstream