rs33597582 SNP Detail

Summary

• ID
  rs33597582
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84470170 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTGGAACTC ACTCTGTAGA CCAGGCTGGC TTCGAACTCA
  GAAATCCGCC TGTCTCTGCC TCCCAAGTGC TGGGATTAAA GACGTGCACC ACCACTGCCC
  K
  ACTAAGAAGA AACATTTTGT AAAAATAAAA TAAATATTTT ATTTGGAAAA AAGTCAGTTT
  CTTACATAGC TTTTAAATTT TAAATAACTT TAAATCTTT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46295169	mCV23004531	ABI	CRAMUS_MOUSE	f	SNP	G	G	T	G
ss322745694	CHEV_8_86267440	CHEVERUD	SCREENING_POP	f	SNP					G	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33597582					SNP	G	G	T	G	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84470170 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20655	CpG island 20655	1851 bp distal
Gm46046	predicted gene, 46046	within coordinates
Rr666303	regulatory region 666303	1362 bp distal
Rr666304	regulatory region 666304	725 bp distal
Tssr2621	transcription start site region 2621	976 bp downstream