rs33599834 SNP Detail

Summary

• ID
  rs33599834
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:7238154 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GATCACAGGG CCCCCAATGG AGGAGCTAGA GAAAGTACAC
  AAGGAGCTAA AGGGAACTGC AACCCTATAG GTGGAACAAC AATATGAACT AACCAGTACC
  Y
  ACCGGAGCTC TTGACTCTAG CTGCATATGT ATCAGAAGAT GACCTAGTTG GCCATCACTG
  GAAAGAGAGG CCCATTGGAC AGGCAAACTT TATATGCCC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J
ss45798811	mCV24857528	ABI	CRAMUS_MOUSE	f	SNP	T	C	T
ss147805342	ENSMUSSNP5102411	ENSEMBL	ENSEMBL_Sanger	f	SNP			T
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J
rs33599834					SNP	T	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:7238154 () rs orientation: forward

Symbol	Name	Function Class
Gm72407	predicted gene, 72407	within coordinates
Tssr50074	transcription start site region 50074	1726 bp upstream
Zfp804b	zinc finger protein 804B	within coordinates