rs33604751 SNP Detail

Summary

• ID
  rs33604751
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:11824598 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAAGCCCT GACTATACAT
  AAGTTTACAG TCTTGTGGCA GGGGTTGACA GAGGAAAATG ATTGGGAGCA CCCAAAGCAA
  AAGGAGCACT GAGGTGGAAA GCACTAAAGT GGGGAGCATT GGGTGCTATG GGACAGAAAA
  GGCAGGCCAC GTGTTGAGGA AAGCTGCATA GAGATTCTCA TAGAGGAGAT GATGTCAGAG
  M
  CAAGGCTTGA CCTGGGATCA TCTCTGCAAG AAGGATTTGA CAGGATGGCG AGGGACAGAG
  GAGGTGGATA CACAAGGGAG CAGATCTGCT GAGAGTCAGG GGTAAATTGA AGAGACTAGA
  ATTCACTTCA GGTAGTCAAA GCAAAAGAAG ATTCCTTGGA GGAGGGATTA TTAAGATGCT
  AACTATTCTT TGGAGAGCAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
ss46833705	NES10978104	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	A	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ
rs33604751					SNP	C	C	C	C	C	A	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss46833705	NES10978104	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:11824598 () rs orientation: forward

Symbol	Name	Function Class
Rr5319	regulatory region 5319	1998 bp distal
Rr394732	regulatory region 394732	180 bp downstream