rs33607691 SNP Detail

Summary

• ID
  rs33607691
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:24034187 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACTCC GCTCCTTGTT GAGCAACATG
  W
  CGACTCCCCA CGACCCCTTG CAGCA                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39556861	mCV22837862	ABI	CRAMUS_MOUSE	f	SNP	A	A	A	T	A
ss145333352	ENSMUSSNP5751715	ENSEMBL	ENSEMBL_Sanger	f	SNP		A	A
ss325327505	CHEV_17_23952180	CHEVERUD	SCREENING_POP	f	SNP						A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33607691					SNP	A	A	A	T	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:24034187 () rs orientation: forward

Symbol	Name	Function Class
Gm49911	predicted gene, 49911	1713 bp upstream
Srrm2	serine/arginine repetitive matrix 2	within coordinates
Tssr142964	transcription start site region 142964	1747 bp downstream
Tssr142965	transcription start site region 142965	22 bp downstream
Tssr142966	transcription start site region 142966	within coordinates
Tssr142967	transcription start site region 142967	59 bp upstream
Tssr142968	transcription start site region 142968	74 bp upstream
Tssr142969	transcription start site region 142969	842 bp upstream
Tssr142970	transcription start site region 142970	871 bp upstream
Tssr142971	transcription start site region 142971	939 bp upstream
Tssr142972	transcription start site region 142972	984 bp upstream
Tssr142973	transcription start site region 142973	998 bp upstream
Tssr142974	transcription start site region 142974	1035 bp upstream
Tssr142975	transcription start site region 142975	1059 bp upstream
Tssr142976	transcription start site region 142976	1087 bp upstream
Tssr142977	transcription start site region 142977	1145 bp upstream
Tssr142978	transcription start site region 142978	1190 bp upstream
Tssr146670	transcription start site region 146670	28 bp downstream