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rs33610974 SNP Detail
Summary
  • ID
    rs33610974
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr8:70686809 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                          AAGGG TGGGGCTCGC AGCTGTCACC
    Y
    GAGACTTTGC CTTTGGCTCC TTCGA                                      
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
ss46296484 mCV27580525 ABI CRAMUS_MOUSE f SNP T T C C T
ss145122505 ENSMUSSNP2070551 ENSEMBL ENSEMBL_Sanger f SNP C T
ss322699304 CHEV_8_72758058 CHEVERUD SCREENING_POP f SNP T T
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
129X1/SvJ
A/J
C57BL/6J
DBA/2J
LG/J
SM/J
rs33610974 SNP T T C C T T T
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr8:70686809 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Armc6 armadillo repeat containing 6 within coordinates
Cpgi20446 CpG island 20446 within coordinates
Rr400897 regulatory region 400897 195 bp upstream
Sugp2 SURP and G patch domain containing 2 29 bp upstream
Tssr77717 transcription start site region 77717 28 bp upstream
Tssr77718 transcription start site region 77718 373 bp upstream
Tssr77719 transcription start site region 77719 454 bp upstream
Tssr77720 transcription start site region 77720 482 bp upstream
Tssr81601 transcription start site region 81601 within coordinates
Tssr81602 transcription start site region 81602 242 bp downstream

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory