rs33611956 SNP Detail

Summary

• ID
  rs33611956
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:46855839 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTTCTGACC TCCAAGGGCA
  CCCTGCACAT ACATACAGGC AAAACACTCA TGCACACAAA ATAAATCCTT TTTAATTTAT
  TTAAAAATAA AATATATGGC CGGGCAGTGG TGGCGCATGC CTTTAATCCC AGCACTTGGG
  AGGCAGGGGC AGGTGGATTT CTGAGTTGGA GGCCAGCCTG GTCTACAGAG TGAGTTCCAG
  R
  ACAGCCAGGG CTACACAGAG CAACCCTGTC TCGAAAAAAG CAAATAAAAT AAATAAATCT
  GTGTGTATGA ATTTTGTTTG TGTATTTGTC TGTGCAGCAC TTGCCTGGTG CCCTTGGAGG
  CCAGGGAAGG CATCAGATCC CCTGGAAGTC GAGTTAGACA TGGTTTTCAG CATTATATGG
  GTGCTGGGGA TTGAACCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss39556889	mCV22916630	ABI	CRAMUS_MOUSE	f	SNP	A	G	G
ss145700331	ENSMUSSNP6906215	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs33611956					SNP	A	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:46855839 () rs orientation: forward

Symbol	Name	Function Class
Cpgi9232	CpG island 9232	1044 bp proximal
Cul9	cullin 9	within coordinates
Rr527757	regulatory region 527757	802 bp proximal
Rr527758	regulatory region 527758	1465 bp proximal
Tssr148330	transcription start site region 148330	1362 bp downstream