rs33613286 SNP Detail

Summary

• ID
  rs33613286
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:15011838 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGTG TCATTTAGAG TTGGGTACCC
  R
  CCCCCTTCTG TGGTGCTTGA TGTAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46296773	mCV24632720	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	G
ss148693644	ENSMUSSNP1186696	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G		G
ss322517077	CHEV_8_14961838	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33613286					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:15011838 () rs orientation: forward

Symbol	Name	Function Class
Arhgef10	Rho guanine nucleotide exchange factor 10	within coordinates
Gm16350	predicted gene 16350	252 bp upstream
Rr400772	regulatory region 400772	58 bp downstream
Rr660140	regulatory region 660140	263 bp distal
Rr660141	regulatory region 660141	within coordinates
Tssr76469	transcription start site region 76469	16 bp downstream
Tssr76470	transcription start site region 76470	42 bp upstream
Tssr76471	transcription start site region 76471	63 bp upstream
Tssr80480	transcription start site region 80480	248 bp upstream