rs33614466 SNP Detail

Summary

• ID
  rs33614466
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:97063763 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAAGGAAGT TCCTCTGCCA
  AGGCCACTTA AAATAGCACT TTCAGTTATG CCTAGTACTT CTTAACTCTT TGGAGGCAGG
  CAAAAATTTC ATCATCTTCA GTTAAAATGA GTAAACCATA ATAAATAGTA TAGATATCTA
  CTGAAAATGG AAAGATCTGA AAACATGTGC AGACAGAAAA CATGTGCAGA GGAACAAAAA
  W
  TATGTAGATA AATACACAAA TAAGTGTAGG TGCATGTATG TGCATCTATA TGCATATAAA
  TGAGATGAAA GTATTTGGAT TTAATAAAAG CACACAGAAA AAAAAATTCC CATTATCACA
  AACTACTGGT AGTTGTTTCA GCATGTGTTA TGTGATAGGT AGCTTTATGT GTAATAGCTG
  GGGTCAGTTA AAAGTCAGTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss45300231	mCV24368827	ABI	CRAMUS_MOUSE	f	SNP	A	T	T	T
ss146991576	ENSMUSSNP4180756	ENSEMBL	ENSEMBL_Sanger	f	SNP		T		T
ss320412932	CHEV_2_97073575	CHEVERUD	SCREENING_POP	f	SNP					A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33614466					SNP	A	T	T	T	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:97063763 () rs orientation: forward

Symbol	Name	Function Class
Lrrc4c	leucine rich repeat containing 4C	Intron
Rr561442	regulatory region 561442	92 bp distal