rs33615186 SNP Detail

Summary

• ID
  rs33615186
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:84928324 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGCCC AGGGCTGGCA CGCGGCGCAT
  R
  TGCGTGACAG GGCGTGTCCA GGGGG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46297357	mCV24182216	ABI	CRAMUS_MOUSE	f	SNP	A	A	G
ss145374893	ENSMUSSNP6765037	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A		A
ss322748104	CHEV_8_86725594	CHEVERUD	SCREENING_POP	f	SNP					A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33615186					SNP	A	A	G	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:84928324 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20683	CpG island 20683	within coordinates
Cpgi20684	CpG island 20684	1729 bp proximal
Gm37352	predicted gene, 37352	within coordinates
Gm56841	predicted gene, 56841	1025 bp downstream
Gm64014	predicted gene, 64014	952 bp upstream
Gm64130	predicted gene, 64130	30 bp upstream
Gm65345	predicted gene, 65345	within coordinates
Rr186983	regulatory region 186983	within coordinates
Tssr78372	transcription start site region 78372	849 bp downstream
Tssr78373	transcription start site region 78373	820 bp downstream
Tssr78374	transcription start site region 78374	748 bp downstream
Tssr78375	transcription start site region 78375	71 bp upstream
Tssr82082	transcription start site region 82082	1040 bp upstream
Tssr82083	transcription start site region 82083	945 bp upstream
Tssr82084	transcription start site region 82084	27 bp upstream
Tssr82085	transcription start site region 82085	266 bp downstream
Tssr82086	transcription start site region 82086	288 bp downstream
Tssr82087	transcription start site region 82087	317 bp downstream
Tssr82088	transcription start site region 82088	1788 bp downstream
Tssr82089	transcription start site region 82089	1826 bp downstream
Tssr82090	transcription start site region 82090	1973 bp downstream