rs33616791 SNP Detail

Summary

• ID
  rs33616791
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:34727419 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTCTAACCCC CATCATGCTG GCAGTCAAGA TGAACTATCA
  CACAATACAT TGTTAACTAA CCACTGCCAC AGTGGTTTAC AATAGAGCCC TTGAACGGTC
  Y
  TCCCGGCCAG CTGAAATGTG CTCTTTGACC AACAGCTCGC TGTTATTCTC TATCTCTAGC
  CTCAGGGAGC CATGTTCTAC CCTTGCTTCT CTGAGCCCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss46297552	mCV22854752	ABI	CRAMUS_MOUSE	f	SNP	C	T	C
ss149099957	ENSMUSSNP928543	ENSEMBL	ENSEMBL_Sanger	f	SNP	C		C
ss322576442	CHEV_8_35323319	CHEVERUD	SCREENING_POP	f	SNP				C	C
SNP Consensus Information
SNP					Consensus Type	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33616791					SNP	C	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:34727419 () rs orientation: forward

Symbol	Name	Function Class
Gm63978	predicted gene, 63978	within coordinates
Gm63981	predicted gene, 63981	within coordinates
Rr661992	regulatory region 661992	1603 bp proximal
Tssr80908	transcription start site region 80908	263 bp downstream