rs33619717 SNP Detail

Summary

• ID
  rs33619717
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:18119996 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACGCCCACAC ATACAAACAA AGAAACCAAA CCAAAACAAT
  GAAAACAAAC ACATAAAACA TAAAAATCAT CTCACTGTGG AAAATATAGA AAAGGTGGCC
  Y
  ATCTCCAATA AAGTCACTTG CTAGCCTTAG CCTCTCTGAT GGCTCCTGAC AATCTGTGAT
  GAGTGACCTC TGAAAGGCAG GGTATCCAGA GACTTCATC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss39558257	mCV22802858	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss145228032	ENSMUSSNP5977856	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
ss325312434	CHEV_17_18036698	CHEVERUD	SCREENING_POP	f	SNP					C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs33619717					SNP	C	C	T	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:18119996 () rs orientation: forward

Symbol	Name	Function Class
Rr329600	regulatory region 329600	within coordinates
Rr336961	regulatory region 336961	76 bp distal
Rr343850	regulatory region 343850	871 bp proximal
Rr343851	regulatory region 343851	1030 bp proximal
Tssr142835	transcription start site region 142835	102 bp downstream