rs33621350 SNP Detail

Summary

• ID
  rs33621350
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  125
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:75826101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGGG AGATAAATGA TAGCAGGCGT
  R
  TTAAAACTCT AAAGCAGCAG GAGAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss39558847	mCV24424671	ABI	CRAMUS_MOUSE	f	SNP	A	G					G
ss62906309	NES17396601	PERLEGEN	MM_PANEL2	f	SNP			G	A	G	G		A	A		A	A		G
ss145965538	ENSMUSSNP18228	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	G					G
ss325452200	CHEV_17_75918446	CHEVERUD	SCREENING_POP	f	SNP										A			G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs33621350					SNP	A	G	G	A	G	G	G	A	A	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss62906309	NES17396601	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:75826101 () rs orientation: forward

Symbol	Name	Function Class
Rasgrp3	RAS, guanyl releasing protein 3	within coordinates
Rr405453	regulatory region 405453	405 bp downstream
Rr531052	regulatory region 531052	283 bp distal
Rr531053	regulatory region 531053	354 bp distal
Tssr145886	transcription start site region 145886	1516 bp upstream
Tssr149392	transcription start site region 149392	684 bp upstream